PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004505159.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family bHLH
Protein Properties Length: 164aa    MW: 18134.7 Da    PI: 7.9287
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004505159.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH149.3e-0556951054
                    HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH 10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                    + R +++ +++  L++l+ +      +K + +++L++A+eYI  L
  XP_004505159.1 56 KDRKEKLGERIVALQQLVSPY-----GKTDTSSVLKEAMEYIGFL 95
                    667788889999999999999.....9***************887 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000831.43E-54599No hitNo description
PROSITE profilePS5088810.5634695IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.106.4E-75399IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474593.4E-956101IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 164 aa     Download sequence    Send to blast
MIASSFCNAD SMFSREEGID VRKMMGHKRS PCSVDQSSYN SIASKKQKPD LEITTKDRKE  60
KLGERIVALQ QLVSPYGKTD TSSVLKEAME YIGFLHKQLL SAPYLETSPA TEMQGTESCS  120
LRSRGLCLVP VSFTIGVAEG NGADIWAPIK TNSPKYEKDV SQFQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKT0310981e-159KT031098.1 Glycine max clone HN_CCL_42 bHLH transcription factor (Glyma02g15520.1) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004505159.11e-121PREDICTED: transcription factor bHLH113 isoform X2
SwissprotQ8GXT39e-29BH123_ARATH; Transcription factor bHLH123
SwissprotQ9LT672e-29BH113_ARATH; Transcription factor bHLH113
TrEMBLG7JNL41e-110G7JNL4_MEDTR; BHLH transcription factor-like protein
STRINGGLYMA07G32980.11e-103(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G05710.56e-52bHLH family protein